forked from Ponysearch/Ponysearch
parent
df0d915806
commit
d20bba6dc7
3 changed files with 8 additions and 13 deletions
|
@ -11,9 +11,11 @@
|
|||
More info on api: https://www.ncbi.nlm.nih.gov/books/NBK25501/
|
||||
"""
|
||||
|
||||
from flask_babel import gettext
|
||||
from lxml import etree
|
||||
from datetime import datetime
|
||||
from searx.url_utils import urlencode, urlopen
|
||||
from searx.url_utils import urlencode
|
||||
from searx.poolrequests import get
|
||||
|
||||
|
||||
categories = ['science']
|
||||
|
@ -46,12 +48,7 @@ def response(resp):
|
|||
pubmed_retrieve_api_url = 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?'\
|
||||
+ 'db=pubmed&retmode=xml&id={pmids_string}'
|
||||
|
||||
# handle Python2 vs Python3 management of bytes and strings
|
||||
try:
|
||||
pmids_results = etree.XML(resp.text.encode('utf-8'))
|
||||
except AttributeError:
|
||||
pmids_results = etree.XML(resp.text)
|
||||
|
||||
pmids_results = etree.XML(resp.content)
|
||||
pmids = pmids_results.xpath('//eSearchResult/IdList/Id')
|
||||
pmids_string = ''
|
||||
|
||||
|
@ -62,7 +59,7 @@ def response(resp):
|
|||
|
||||
retrieve_url_encoded = pubmed_retrieve_api_url.format(**retrieve_notice_args)
|
||||
|
||||
search_results_xml = urlopen(retrieve_url_encoded).read()
|
||||
search_results_xml = get(retrieve_url_encoded).content
|
||||
search_results = etree.XML(search_results_xml).xpath('//PubmedArticleSet/PubmedArticle/MedlineCitation')
|
||||
|
||||
for entry in search_results:
|
||||
|
@ -74,12 +71,12 @@ def response(resp):
|
|||
try:
|
||||
content = entry.xpath('.//Abstract/AbstractText')[0].text
|
||||
except:
|
||||
content = 'No abstract is available for this publication.'
|
||||
content = gettext('No abstract is available for this publication.')
|
||||
|
||||
# If a doi is available, add it to the snipppet
|
||||
try:
|
||||
doi = entry.xpath('.//ELocationID[@EIdType="doi"]')[0].text
|
||||
content = 'DOI: ' + doi + ' Abstract: ' + content
|
||||
content = 'DOI: {doi} Abstract: {content}'.format(doi=doi, content=content)
|
||||
except:
|
||||
pass
|
||||
|
||||
|
|
|
@ -464,7 +464,7 @@ engines:
|
|||
engine : pubmed
|
||||
shortcut : pub
|
||||
categories: science
|
||||
oa_first : false
|
||||
timeout : 3.0
|
||||
|
||||
- name : qwant
|
||||
engine : qwant
|
||||
|
|
|
@ -3,7 +3,6 @@ from sys import version_info
|
|||
if version_info[0] == 2:
|
||||
from urllib import quote, quote_plus, unquote, urlencode
|
||||
from urlparse import parse_qs, parse_qsl, urljoin, urlparse, urlunparse, ParseResult
|
||||
from urllib2 import urlopen
|
||||
else:
|
||||
from urllib.parse import (
|
||||
parse_qs,
|
||||
|
@ -17,7 +16,6 @@ else:
|
|||
urlunparse,
|
||||
ParseResult
|
||||
)
|
||||
from urllib.request import urlopen
|
||||
|
||||
|
||||
__export__ = (parse_qs,
|
||||
|
|
Loading…
Reference in a new issue